Create AGENTS.md at repo root and core/AGENTS.md as provider-agnostic sources of always-on rules. Slim both CLAUDE.md files to thin adapters. Deploy core/AGENTS.md → ~/.agents/AGENTS.md via deploy-manifest.sh. Update three test suites to check correct locations post-refactor. All automated tests pass (57 instructions, 106 install, 25 governance). HITL behavioral test plan in test-instructions-and-docs.sh scenarios 9–12. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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Architecture
Current deployed architecture. Updated in the same PR as any structural change.
Layered model
this repo (global defaults)
├── install.sh → ~/.agents/skills/ (canonical skills location)
├── install.sh → ~/.claude/skills/ (symlink → ~/.agents/skills/, Claude Code adapter)
└── install.sh → ~/.claude/ (Claude Code config + content)
project repo (local overrides)
└── .claude/settings.json, CLAUDE.md (overrides global)
Projects consume from this repo by pulling updates via sync.sh (Chunk 6). Until then, install is a one-time manual step.
Directory structure
ai-development/
├── AGENTS.md # Provider-agnostic always-on rules for this repo; imported by repo CLAUDE.md
├── CONTEXT.md # Domain language, principles, glossary; auto-loaded at session start
├── docs/ # Workflow artifacts and issues (prd/, ard/, bug/, notes/, adr/, issues/, spec/) + research/ (raw research audit trail)
├── .agents/ # Agent Skills standard location (provider-agnostic)
│ └── skills/ # SKILL.md files — canonical source, deployed to ~/.agents/skills/
├── core/ # Provider-agnostic source of truth
│ ├── AGENTS.md # Global always-on rules (Communication + Behavior); deployed to ~/.agents/AGENTS.md
│ ├── instructions/ # AI behavior definitions (plain markdown)
│ ├── agents/ # Agent role definitions
│ ├── workflows/ # Workflow definitions
│ └── prompts/ # Reusable prompt templates
├── providers/ # Provider-specific adapters
│ ├── claude-code/ # CLAUDE.md (thin adapter), settings.json, provider-manifest.sh
│ └── copilot/ # copilot-instructions.md, hooks, agents adapter
├── templates/ # Project scaffolding templates
└── scripts/
├── deploy-manifest.sh # Source→target mappings; sourced by install.sh and sync.sh
├── install.sh # Deploys to ~/.agents/skills/, ~/.claude/, etc.
├── sync.sh # Pulls updates into an existing project
└── init-project.sh # Bootstraps a new or existing project
Content deployment model
install.sh is a deployer, not a composer. It does not concatenate content into a single file. Instead:
.agents/skills/→~/.agents/skills/— canonical skills location; each skill dir is replaced individually (parent not wiped, user-added skills preserved)core/AGENTS.md→~/.agents/AGENTS.md— global always-on rules (Communication + Behavior); imported by~/.claude/CLAUDE.mdvia@~/.agents/AGENTS.md- Provider adapters declared in
providers/*/provider-manifest.sh— symlinks from the provider's skill path to~/.agents/skills/; e.g. Claude Code gets~/.claude/skills/ → ~/.agents/skills/because it reads~/.claude/skills/natively. Providers that read~/.agents/skills/directly need no adapter. core/→~/.claude/core/— workflows, prompts, agent definitions; agent reads on demandproviders/claude-code/settings.json→~/.claude/settings.jsonproviders/claude-code/CLAUDE.md→~/.claude/CLAUDE.md— thin adapter: imports~/.agents/AGENTS.mdandgovernance.md; no original content
~/.claude/CLAUDE.md is a thin adapter, not a content source. It imports ~/.agents/AGENTS.md (always-on rules) and governance.md (always-on governance), then lists the content index. All always-on content lives in AGENTS.md files so other providers can import the same source without duplication.
Governance layer
core/instructions/governance.md is the always-on governance instruction file. Unlike the on-demand instruction files in the content index, governance.md is loaded into every Claude session via @import in providers/claude-code/CLAUDE.md. This is a technical guarantee, not a behavioural instruction — @import causes Claude Code to expand and load the file at launch, before any interaction begins.
The governance layer has two phases:
- Phase 1 (complete): instruction and documentation layer —
governance.mdloaded via@import;docs/ai-constitution.mdanddocs/HUMANS.mdas human-facing reference;CONTEXT.mdextended with governance domain language. - Phase 2 (Chunk 6): deterministic enforcement layer — pre-commit hooks, CI gates, secret scanning, licence scanning. Specified in
docs/research/governance_principles/CONTROLS.md.
AGENTS.md pattern
This repo uses two AGENTS.md files as the provider-agnostic source of always-on rules (ADR-0012):
- Repo-level
AGENTS.md— instructions for agents working inside this repo (structure, key rules, chunk workflow). Imported by repoCLAUDE.mdvia@AGENTS.md. - Global
core/AGENTS.md— Communication and Behavior rules that apply across all projects. Deployed to~/.agents/AGENTS.md; imported by~/.claude/CLAUDE.mdvia@~/.agents/AGENTS.md.
Both CLAUDE.md files are thin adapters: they import from their respective AGENTS.md and add only Claude Code-specific syntax (@import, content index paths). They carry no original always-on content.
This repo also has a CLAUDE.md at its root — the Claude Code entry point for working in this repo. It imports AGENTS.md and CONTEXT.md, nothing more. This is distinct from providers/claude-code/CLAUDE.md, which is the global config deployed to ~/.claude/.
Provider model
core/ is never tool-specific. providers/ is never shared. When adding a new provider, write an adapter in providers/<name>/ that translates core content into the tool's expected format and location. The core content itself does not change.
Skills are the strongest shared primitive — the SKILL.md format and Agent Skills open standard are cross-provider. Providers that don't read ~/.agents/skills/ natively declare a symlink adapter in providers/<name>/provider-manifest.sh; install.sh discovers and wires these up automatically.
Architectural decisions
Key hard-to-reverse decisions are recorded as ADRs in docs/adr/. See the index there for rationale on choices like the pull distribution model, copy-not-symlink coupling, and the two-tier CLAUDE.md structure.